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Details




NbTI03C08

Phenotype Description
Pale green leaves
Annotation
Solyc12g088530.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch12 gene_region:62294192-62296328 transcript_region:SL2.50ch12:62294192..62296328+ functional_description:"Cyclin A-like protein (AHRD V1 ***- Q40492_TOBAC); contains Interpro domain(s) IPR015453 G2/mitotic-specific cyclin A "
ref|XP_009777214.1|;PREDICTED: putative cyclin-A3-1 [Nicotiana sylvestris]
NbS00015274g0005.1;protein AED:0.07 eAED:0.07 QI:57|1|1|1|0.8|0.83|6|204|367; (*GB) gi|1072390|emb|CAA63753.1| (e_value=0.0) cyclin A-like protein [Nicotiana tabacum];; (*SWP) sp|Q9FMH5|CCA31_ARATH (e_value=2e-147) Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1;; (*TAIR) AT5G43080.1 (e_value=1e-148) | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-17294789 FORWARD LENGTH=355;; (*ITAG) Solyc12g088530.1.1 (e_value=0.0) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch12 gene_region:62294192-62296328 transcript_region:SL2.40ch12:62294192..62296328+ functional_description:"Cyclin A-like protein (AHRD V1 ***- Q40492_TOBAC); contains Interpro domain(s) IPR015453 G2/mitotic-specific cyclin A ";
AT1G47210.2;| Symbols: CYCA3;2 | cyclin-dependent protein kinase 3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
GO ID (Nr annotation)
GO:0005634
GO ID (Arabidopsis annotation)
GO:0000139 GO:0005791 GO:0005829 GO:0005887 GO:0009986 GO:0010008 GO:0030426 GO:0043195 GO:0043197 GO:0043204 GO:0043235 GO:0045211 GO:0048786 GO:0097481 GO:0005524 GO:0008528 GO:0030971 GO:0042803 GO:0048403 GO:0060175 GO:0001570 GO:0001764 GO:0006954 GO:0007528 GO:0007568 GO:0007612 GO:0007616 GO:0007623 GO:0007631 GO:0008284 GO:0009416 GO:0010628 GO:0010996 GO:0014047 GO:0014068 GO:0018108 GO:0021954 GO:0021987 GO:0031547 GO:0033138 GO:0035584 GO:0038179 GO:0042490 GO:0043087 GO:0043410 GO:0043524 GO:0044058 GO:0044702 GO:0044703 GO:0044706 GO:0046548 GO:0046777 GO:0046928 GO:0048545 GO:0048609 GO:0048709 GO:0048935 GO:0050772 GO:0050773 GO:0051705 GO:0051896 GO:0051965 GO:0051968 GO:0060041 GO:0060291 GO:0071230 GO:0071356 GO:1990416 GO:2000324 GO:2000811
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005576 GO:0005634 GO:0030141 GO:0044446 GO:0006955 GO:0016525 GO:0030155 GO:0033604 GO:0045576 GO:0046676 GO:0050829 GO:0050830 GO:0050832 GO:0051179
Sequence
>NbTI03C08
GTGTGTAGTTTGCGAGAGTGAGTAGGAAGAAATGGCAGACCATGCAAGTTCTATTAGAGTGACTCGATTAGCCAAGAAAAGGGCAGCAGAAGCTATGGTT
CAGCACCTGCAACAGCCCAACAAGAAGAGAGTGGTGTTGGGTGAGATTCAGATTTTGTCCAATCAGATTCAGATGTTTGATTCTGAGCCTCTGAAGCCCA
AATATAATAAGCAGACTACAAAGAAGAAGGTGAAAAGGTCTGTTAGTGTGAAAGAGAAAGATTTTAGGGAGGAAGATGTTGATTCTAAATTGGACGATGA
CCCCCAGATGTGCAGCGCTTATGTTTCTGATATTTATGATTATCTTCATCAAATGGAGATTGAGAAAAAGAGAAGACCATTGTCTGATTACCTTGAGAAA
G
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3C8..JPG