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Details




NbTI01A06

Phenotype Description
Stunted plants, narrow top leaves, yellow green, mottled leaves
Annotation
Solyc01g103890.2.1;genomic_reference:SL2.50ch01 gene_region:84151906-84158425 transcript_region:SL2.50ch01:84151906..84158425- functional_description:"Magnesium transporter MRS2-4 (AHRD V1 **** MRS24_ARATH); contains Interpro domain(s) IPR002523 Mg2+ transporter protein, CorA-like "
ref|XP_009602807.1|;PREDICTED: magnesium transporter MRS2-4 [Nicotiana tomentosiformis]
NbS00059949g0004.1;protein AED:0.02 eAED:0.02 QI:262|1|1|1|0.66|0.75|4|307|433; (*SWP) sp|Q93ZD7|MRS24_ARATH (e_value=2e-174) Magnesium transporter MRS2-4 OS=Arabidopsis thaliana GN=MRS2-4 PE=1 SV=1;; (*TAIR) AT3G58970.1 (e_value=2e-175) | Symbols: MGT6, MRS2-4 | magnesium transporter 6 | chr3:21789659-21791163 REVERSE LENGTH=436;; (*ITAG) Solyc01g103890.2.1 (e_value=0.0) genomic_reference:SL2.40ch01 gene_region:84151906-84158425 transcript_region:SL2.40ch01:84151906..84158425- functional_description:"Magnesium transporter MRS2-4 (AHRD V1 **** MRS24_ARATH); contains Interpro domain(s) IPR002523 Mg2+ transporter protein, CorA-like ";
AT3G58970.1;| Symbols: MGT6, MRS2-4 | magnesium transporter 6 | chr3:21789659-21791163 REVERSE LENGTH=436
GO ID (Nr annotation)
GO:0016020 GO:0046873 GO:0030001 GO:0055085
GO ID (Arabidopsis annotation)
GO:0016020 GO:0046873 GO:0030001 GO:0055085
GO ID (Tomato annotation)
GO:0016020 GO:0046873 GO:0030001 GO:0055085
GO ID (Niben annotation)
GO:0016020 GO:0046873 GO:0030001 GO:0055085
Sequence
>NbTI01A06
GACTATTGTTTCAAATAGCCTTGTTCCTGTTGTACCGAATCTTCGTAGGCTTAATTCTGCCAGAAGCAGAAGTGGAAGTTTGGTGAGCAACCATTTTAAT
GACAATGATGTGGAGGATTTGGAGATGCTGCTCGATGCCTACTTCATGCAGCTGGAAGGCACTCGTAACAAGATATTATCTGTCCGTGAGTACATTGATG
ACACAGAAGATTACGTCAATATCCAACTCGACAATCAGCGTAATGAGCTTATTCAGCTGCAGTTAACATTGACCATTGCATCATTTGCTATAGCTATGGA
GACGCTGATAGCTGGGTGGTTTGGCATGAATATACCTTGTACCTTATACAACACTGATGGGCTATTTTGGCCTTTTGTAACAGGCATCACACTAGGTTGT
ATAATACTCTTCCTTCTTATCTTGGGATATGCAAGATGGAAGAAGTTGCTTGGGTCATGAATTCCTCTATTGTCAAGGTTTACAAGTTGTATTAATACAA
AGCCAAATTTTAATTTTGCCACCTAAACATTTCTATCCATTATCATTTTTGTTGGAGCTT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

4-1:1A1-1D12 [6-20-12]//1A6b-2.JPG