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Details




NbTI01B01

Phenotype Description
Few, pale green, crinkled leaves
Annotation
Solyc06g050730.2.1;genomic_reference:SL2.50ch06 gene_region:29994029-29995792 transcript_region:SL2.50ch06:29994029..29995792- functional_description:"Genomic DNA chromosome 5 TAC clone K18I23 (AHRD V1 *-*- Q9FLB8_ARATH); contains Interpro domain(s) IPR006597 Sel1-like "
ref|XP_009796725.1|;PREDICTED: uncharacterized protein LOC104243262 [Nicotiana sylvestris]ref|XP_009796726.1| PREDICTED: uncharacterized protein LOC104243262 [Nicotiana sylvestris]
NbS00003385g0202.1;protein AED:0.39 eAED:0.39 QI:260|1|1|1|0.5|0.2|5|486|175
AT5G05360.1;| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:1588356-1589178 FORWARD LENGTH=163
GO ID (Nr annotation)
GO:0005515
GO ID (Arabidopsis annotation)
GO:0005515
GO ID (Tomato annotation)
GO:0005515
GO ID (Niben annotation)
GO:0005515
Sequence
>NbTI01B01
GCAACTCCAATAACAGGATCCACGGCCCGACTCAACTCAAACCACCCGCATCCAGAATTAGGTCAGTTCCATCCGCAAAGTCCAGGGCGGTGGTCGGCGG
CGATTCATCGGAGCGGCGGCTAAAGTTGAAGACGAAGAACATGGAAGAAGCAAGCTCTAACTCCAATTCGAATACTTCTTCGTCGAACCAACAGCGGCAA
CGGGTACCTCTTGCTGACGTGGTAGCTGACTGTGTGAAGCGGTGGTTCCAGGATACTCTCAAGGAGGCTAAAGCCGGTGACATTAGCATGCAGGTCCTTG
TTGGTCAGATGTATTATAGTGGCTATGGTATTTCCAGAGATGCACAGAAGGGAAGATCTTGGATTAACCGAGCTTCAAAGAGTCGGTCATCAGCGTGGAA
AGTGAGTGATAAACGCCCGGGCTATAATGCTAGTGATTCTGATTCTGATGATACTGTGGAGGACGCAAAGTAAAATTGAAGCACTTTTCACATGTAAAAG
AAGCTATAACATTTGTATTTTTGTGCTATGCCTATGCCAGCTGCCAATCCTTTGCAGTTTTGTAACAGACTGGACTTACTGTTCTGATCTTCATGGTCGT
TTTTCATTGAAGTACTCCATGTCCATACTGTTATTTGCCTAACTGGACTGATAGCAAATCACTTTCTTTACATTATATTTTCTCTGTCATGGTGGTTTGA
TCTTGTAATTCTGGCTTAACTGGGAGGAAAACTGGAAAAGCAATC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1A1-1D12 [6-20-12]//1B1--2.JPG