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Details




NbTI01C02

Phenotype Description
Chlorotic leaves
Annotation
Solyc07g065900.2.1;genomic_reference:SL2.50ch07 gene_region:64716198-64718891 transcript_region:SL2.50ch07:64716198..64718891+ functional_description:"Fructose-bisphosphate aldolase (AHRD V1 ***- A9PEE1_POPTR); contains Interpro domain(s) IPR000741 Fructose-bisphosphate aldolase, class-I "
ref|XP_009799651.1|;PREDICTED: fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Nicotiana sylvestris]
NbS00014198g0009.1;protein AED:0.34 eAED:0.34 QI:244|0.83|0.73|1|0.88|0.78|19|0|804; (*GB) gi|225463508|ref|XP_002263911.1| (e_value=0.0) PREDICTED: uridine kinase-like protein 4 [Vitis vinifera];; (*SWP) sp|Q8VYB2|UKL3_ARATH (e_value=0.0) Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1 SV=1;; (*TAIR) AT1G55810.3 (e_value=0.0) | Symbols: UKL3 | uridine kinase-like 3 | chr1:20861273-20864003 FORWARD LENGTH=466;; (*ITAG) Solyc07g065890.2.1 (e_value=0.0) genomic_reference:SL2.40ch07 gene_region:64709096-64715579 transcript_region:SL2.40ch07:64709096..64715579+ functional_description:"Uridine kinase (AHRD V1 **** B9N5N9_POPTR); contains Interpro domain(s) IPR000764 Uridine kinase ";
AT4G26530.2;| Symbols: | Aldolase superfamily protein | chr4:13391566-13392937 FORWARD LENGTH=358
GO ID (Nr annotation)
GO:0004332 GO:0006096
GO ID (Arabidopsis annotation)
GO:0004332 GO:0006096
GO ID (Tomato annotation)
GO:0004332 GO:0006096
GO ID (Niben annotation)
GO:0004332 GO:0006096
Sequence
>NbTI01C02
TCTCTCACTCACCTCTCTGGTGTCATCCTCTTTGAGGAAACCCTTTACCAAAATACTTCTGATGGCAAGCCTTTTGTCGAAGTTCTCCAAGAAAATAATG
TGGTTCCTGGCATAAAGGTGGACAAGGGTACAGTGGAATTAGCAGGAACCAATGGTGAGACTACAACTCAAGGTTTTGACTCTTTGGGCTCACGTTGTGC
ACAGTACTACAAAGCAGGTGCTCGATTTGCCAAGTGGAGAGCTGTGCTGAAAATTGGACCCACCGAGCCTTCTGAGTTGTCCATCCAGCAGAATGCTCAG
GGACTAGCTCGTTATGCTATCATTTGCCAAGAGAATGGACTAGTGCCAATTGTTGAGCCAGAGATCCTCACTGATGGAGGCCATGACATCAATAAATGTG
CTGCTGCTACTGAAACTGTTCTTGCAGCTGTTTACAAGGCTCTCAATGACCACCATGTTCTTCTTGAAGGAACTCTCTTGAAGCCCAACATGGTCACCCC
TGGCTCTAATAGCCCAAAGGTAAGCATTTCTACTGTGCTAGCTTGCATTAATGTTGCATGTCAAATATATGTGTTTAGTATCATGGGTGGTTATCCAGCT
TTAGTAAGGAAAAATAACTCAGGTATGTCAATACTCTGTATATTACAAAATAT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1A1-1D12 [6-20-12]//1C2.JPG