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Details




NbTI01C07

Phenotype Description
Pale green, droopy leaves
Annotation
Solyc03g096860.2.1;genomic_reference:SL2.50ch03 gene_region:52681721-52685333 transcript_region:SL2.50ch03:52681721..52685333+ functional_description:"Fiber protein Fb34 (AHRD V1 ***- Q6T7D3_GOSBA); contains Interpro domain(s) IPR009606 Protein of unknown function DUF1218 "
ref|XP_009797291.1|;PREDICTED: uncharacterized protein LOC104243743 [Nicotiana sylvestris]
NbS00031870g0006.1;protein AED:0.27 eAED:0.27 QI:323|0.33|0.75|0.75|1|1|4|456|254; (*TAIR) AT5G17210.1 (e_value=3e-59) | Symbols: | Protein of unknown function (DUF1218) | chr5:5656519-5657970 FORWARD LENGTH=209;; (*ITAG) Solyc03g096860.2.1 (e_value=5e-104) genomic_reference:SL2.40ch03 gene_region:52681721-52685333 transcript_region:SL2.40ch03:52681721..52685333+ functional_description:"Fiber protein Fb34 (AHRD V1 ***- Q6T7D3_GOSBA); contains Interpro domain(s) IPR009606 Protein of unknown function DUF1218 ";
AT5G17210.2;| Symbols: | Protein of unknown function (DUF1218) | chr5:5656700-5657970 FORWARD LENGTH=175
GO ID (Nr annotation)
GO:0016021
GO ID (Arabidopsis annotation)
GO:0005737 GO:0043227 GO:0008289
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI01C07
GACGTCTGTTGCCGTCAATATCAGTCAGGATCTAATCGGTCGCTAGCACTACTATGTTTTGTTGTATCCTGGTTTACATTCGTCATAGCATTTATGTTAT
TGCTAACGGGCGCAGCACTGAATGATCAGCATGGTGAAGAGAGCCTGTACTTTGGCAACTACTATTGCTATGTTGTAAAGCCTGGAGTATTTGCTGGAGC
TGCTGTCTTGTCCCTTGCCAGTGTTGCTCTTGGAATCATCTATTACATTTCCTTGGTATCTGCAAAGAACATCAATGATCCATGGCATCCACCAGTACCA
AGTCAAGGTGGCATTGCAATGGGACACCCACAAATTCCTCCACAGACCAGTCAGGAACCAGTTTTTGTCCATGAAGATACTTACATGAGACGCATATCTA
CGTGATTGTCCCTAGATCTTGTATAAACACAAGGACTGGAGGTGAGAAGGGCGAAGAGTCCTCTTCTTTATGTGAACCATTTCTCCCCTTTGTGAGCTTT
CATTGC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1A1-1D12 [6-20-12]//1C7.JPG