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Details




NbTI01C08

Phenotype Description
Pale green, small top leaves
Annotation
Solyc09g010800.2.1;genomic_reference:SL2.50ch09 gene_region:4094901-4096611 transcript_region:SL2.50ch09:4094901..4096611+ functional_description:"Type 2 metallothionein (AHRD V1 ***- B3VKV4_SOLNI); contains Interpro domain(s) IPR000347 Plant metallothionein, family 15 "
ref|XP_009798699.1|;PREDICTED: metallothionein-like protein type 2 [Nicotiana sylvestris]
NbC25904295g0003.1;protein AED:0.13 eAED:0.16 QI:7|-1|0|1|-1|0|1|0|57; (*GB) gi|2497901|sp|Q40396.1|MT2_NICGU (e_value=2e-29) RecName: Full=Metallothionein-like protein type 2;; (*SWP) sp|Q40396|MT2_NICGU (e_value=5e-31) Metallothionein-like protein type 2 OS=Nicotiana glutinosa PE=3 SV=1;; (*TAIR) AT5G02380.1 (e_value=2e-14) | Symbols: MT2B | metallothionein 2B | chr5:506755-507164 REVERSE LENGTH=77;; (*ITAG) Solyc09g010800.2.1 (e_value=1e-27) genomic_reference:SL2.40ch09 gene_region:4094901-4096611 transcript_region:SL2.40ch09:4094901..4096611+ functional_description:"Type 2 metallothionein (AHRD V1 ***- B3VKV4_SOLNI); contains Interpro domain(s) IPR000347 Plant metallothionein, family 15 ";
AT3G09390.1;| Symbols: MT2A, ATMT-K, ATMT-1 | metallothionein 2A | chr3:2889737-2890188 REVERSE LENGTH=81
GO ID (Nr annotation)
GO:0046872
GO ID (Arabidopsis annotation)
GO:0046872
GO ID (Tomato annotation)
GO:0046872
GO ID (Niben annotation)
GO:0046872
Sequence
>NbTI01C08
ACACTTTCTCGTTTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGGCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGAATTACCC
AGATTTGAGCTACAACGAAAGCACCACAACTGAGAGTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGTAATGGGTGAATCCCCT
GCTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAATGAACAATTTAAATCTTAATCAAGCAGAGATGGATGT
TAGCCTTTTATGGCTAAGACAACAAATAACTATAGTTTTAAAAATGTCTAGTTTATTGTTCTTGTGTCTGTTGAAAACAGGGGGAAATTATGTGTTTTTT
CCTCTCTAATAAGAAATAGTAATTGAGAGTCTGAACAATGTTTGGGTTCTTGTTATTGTGGTGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAG
CATCTCGACCTATGTTTTGGGAGTATTTGTGGTTTGGTTTCAACTAATTGAAGAACTTACTTCCATGTTTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1A1-1D12 [6-20-12]//1C8--2.JPG