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Details




NbTI01C10

Phenotype Description
Mottled, crinkled leaves
Annotation
Solyc04g081570.2.1;genomic_reference:SL2.50ch04 gene_region:63110553-63116088 transcript_region:SL2.50ch04:63110553..63116088- functional_description:"Chaperone protein htpG (AHRD V1 **-- HTPG_MYCA1); contains Interpro domain(s) IPR015566 Molecular chaperone, heat shock protein, endoplasmin "
ref|XP_009791518.1|;PREDICTED: endoplasmin homolog [Nicotiana sylvestris]
NbS00031214g0005.1;protein AED:0.20 eAED:0.20 QI:0|0.76|0.64|0.92|0.92|0.85|14|0|842; (*GB) gi|365189292|dbj|BAL42333.1| (e_value=0.0) Heat shock protein 90 [Nicotiana tabacum];; (*SWP) sp|P35016|ENPL_CATRO (e_value=0.0) Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1;; (*TAIR) AT4G24190.2 (e_value=0.0) | Symbols: SHD, AtHsp90.7, AtHsp90-7 | Chaperone protein htpG family protein | chr4:12551902-12555851 REVERSE LENGTH=823;; (*ITAG) Solyc04g081570.2.1 (e_value=0.0) genomic_reference:SL2.40ch04 gene_region:63110553-63116088 transcript_region:SL2.40ch04:63110553..63116088- functional_description:"Chaperone protein htpG (AHRD V1 **-- HTPG_MYCA1); contains Interpro domain(s) IPR015566 Molecular chaperone, heat shock protein, endoplasmin ";
AT4G24190.2;| Symbols: SHD, AtHsp90.7, AtHsp90-7 | Chaperone protein htpG family protein | chr4:12551902-12555851 REVERSE LENGTH=823
GO ID (Nr annotation)
GO:0005524 GO:0051082 GO:0006457 GO:0006950
GO ID (Arabidopsis annotation)
GO:0005524 GO:0051082 GO:0006457 GO:0006950
GO ID (Tomato annotation)
GO:0005524 GO:0051082 GO:0006457 GO:0006950
GO ID (Niben annotation)
GO:0005524 GO:0051082 GO:0006457 GO:0006950
Sequence
>NbTI01C10
GTGGAGGGTGCTCTTGCTAGTGACAATGTAGATGATGTCAAGATTAGCAACCGTTTGGCCGACACCCCTTGTGTAGTTGTGACATCGAAATACGGTTGGA
GTTCCAATATGGAAAGAATCATGCAGTCACAAACTCTGTCAGATGCAAGCAAGCAGGCGTATATGCGGGGTAAAAGGGTGCTTGAGATCAACCCTAGGCA
CCCAATTATTAAGGAGCTTCGGGAGAGAGTAGTAAAGGACCCTGAGGATGAAAGCGTAAAGCAAACGGCTCAGTTAATGTACCAAACAGCATTACTGGAG
AGCGGTTTCCTACTCAATGACCCAAAGGATTTTGCCTCCCGCATCTACAGCTCAGTTAAGAGCAGTTTAAATGTTAGCCCTGATGCAGCAGTTGAGGAAG
AAGAGGATATTGAGGAACCTGAAGCTGAAGCTGATGACAACGAAGCTGCTGCCAAAGATGATTCTGATGCCAAGGACGAATTATAGATTAGTCCAGAAGA
ATGTCCTTTCTCTAGATACAACTACGTAGCAGTCACATGCTATAATCAAGTGCATGTGGATAATTTAAGTTTACAATTGTTAGTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1A1-1D12 [6-20-12]//1C10.JPG