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Details




NbTI01C11

Phenotype Description
Severely stunted plants, no apical meristem, mottled, crinkled, yellow green, thick leaves, cell dea
Annotation
Solyc11g071490.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch11 gene_region:52029448-52031919 transcript_region:SL2.50ch11:52029448..52031919+ functional_description:"Ribosomal protein L30 (AHRD V1 ***- B3TLP4_ELAGV); contains Interpro domain(s) IPR000231 Ribosomal protein L30e "
ref|XP_009609271.1|;PREDICTED: 60S ribosomal protein L30 [Nicotiana tomentosiformis]ref|XP_009798834.1| PREDICTED: 60S ribosomal protein L30 [Nicotiana sylvestris]
NbS00013240g0014.1;protein AED:0.04 eAED:0.04 QI:156|1|1|1|1|1|5|368|112; (*SWP) sp|O49884|RL30_LUPLU (e_value=8e-76) 60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1;; (*TAIR) AT1G36240.1 (e_value=2e-71) | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:13614890-13616233 FORWARD LENGTH=112;; (*ITAG) Solyc11g071490.1.1 (e_value=4e-79) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch11 gene_region:52029448-52031919 transcript_region:SL2.40ch11:52029448..52031919+ functional_description:"Ribosomal protein L30 (AHRD V1 ***- B3TLP4_ELAGV); contains Interpro domain(s) IPR000231 Ribosomal protein L30e ";
AT1G36240.1;| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:13614890-13616233 FORWARD LENGTH=112
GO ID (Nr annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Arabidopsis annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Tomato annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Niben annotation)
GO:0005840 GO:0003735 GO:0006412
Sequence
>NbTI01C11
ACTCCCTTCATTATCGCCGTCGACGCATTTGCCTCTTCCTATAATTTCCGACTACATTTCTCCAGGCCAGAGCCAACCATGGTTGCTGCAAAGAAAACCA
AGAAGACCCATGAGAGTATTAACAACAGGCTGGCTCTGGTAATGAAGAGCGGCAAATACACATTGGGATACAAGACTGTTCTCAAAACTCTTAGAAACTC
CAAAGGCAAACTCGTCATCATTGCCAACAACTGCCCTCCTCTCAGGAAGTCTGAGATAGAGTACTATGCTATGTTGGCAAAGATTGGAGTCCACCACTAC
AATGGAAACAACGTAGATTTGGGGACTGCATGTGGCAAGTATTTCAGAGTCTGTTGCCTCAGCATCATTGATCCAGGTGATTCTGATATCATTAAGAGCA
TGCCTGGTGACCAGTGAGATAGCAGCTGATGTTCGATCGCTATAATGGACACTGCTCAATCTTAGTGGAACTTTGCCGTTCTTCCTTATTGAGAAAAATA
TCTAGTGTAGATGAGTTTTGCTACTGTGGTGATGTTAAAGGAAGTTTTGATGGTATTTGGTATGTTAACGACATC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

3-1:1A1-1D12 [6-20-12]//1C11b--2.JPG