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Details




NbTI01D08

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc01g107640.2.1;genomic_reference:SL2.50ch01 gene_region:86881312-86885702 transcript_region:SL2.50ch01:86881312..86885702- functional_description:"Tic21 (AHRD V1 **-- Q09S70_PEA)"
ref|XP_009593463.1|;PREDICTED: protein TIC 21, chloroplastic [Nicotiana tomentosiformis]
NbS00007076g0005.1;protein AED:0.10 eAED:0.10 QI:0|0.66|0.25|1|0.66|0.5|4|0|293; (*SWP) sp|Q9SHU7|TIC21_ARATH (e_value=2e-92) Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1;; (*TAIR) AT2G15290.1 (e_value=1e-93) | Symbols: ATTIC21, TIC21, CIA5, PIC1 | translocon at inner membrane of chloroplasts 21 | chr2:6642512-6644011 REVERSE LENGTH=296;; (*ITAG) Solyc01g107640.2.1 (e_value=1e-131) genomic_reference:SL2.40ch01 gene_region:86881312-86885702 transcript_region:SL2.40ch01:86881312..86885702- functional_description:"Tic21 (AHRD V1 **-- Q09S70_PEA)";
AT2G15290.1;| Symbols: ATTIC21, TIC21, CIA5, PIC1 | translocon at inner membrane of chloroplasts 21 | chr2:6642512-6644011 REVERSE LENGTH=296
GO ID (Nr annotation)
GO:0009706 GO:0016021 GO:0015088 GO:0042803 GO:0006875 GO:0035434 GO:0045037
GO ID (Arabidopsis annotation)
GO:0034364 GO:0006953
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI01D08
AAGCTACTGCATCTTCGAACTAGCTATGCAAACTCTACTCTTGCCGGCTGCTCACGCCGGCGGTGCACCATTACCACTTCCACCGGCCGGAAAATCATGT
CGGTATAGTTTATTCGGACGCCCAAATACCCTAATTTCTTCGCCGTCCTCATCATTATCTTTTCCCCCCTTAAAGACAAGGCCTCTTTCTTTGCCTCAAT
TTAGTCTCATAAACAAACGGACCAGAATCTTGGCTTCTGCTCCCGTTTCTGCACCCTACACTTCTCCAAATAACGAGTCTGAAAAAGCTAAGTTAGCTCA
GGTTGCGAAAAGACTACAGAATACTGCAAGGTACTTCAAGAGATTCGGTAGTCTGGGGTTCTGGGGACAGCTGGTATGTACGCTTGTTGCTGCGGTGATC
CTTTCATTTTCTATTGTTATTACGGGGAAGATTACATCGCCTTTCACATTCTACTCAACTGCGGGTGGAATTGCAGCTGCTTTTGTTTCAGTTTTTTGGT
CATTCGGCTATATTCGCTTGTCTGAAAAGCTTCGGCGGACAGCTAATGATCCTTCAAAGGCTCCTCCTCGTGCTGATGTTGTGAAAAAGCTTGAAGAATG
GAATAGTTGTGAACCTTCTGGGAATGGGTGCTGCTGGTACTTGGCATGCAAGCAACTGTCGGATCATTGGTGGCTAAG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit