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Details




NbTI01E03

Phenotype Description
Yellow green leaves
Annotation
Solyc06g051720.2.1;genomic_reference:SL2.50ch06 gene_region:31754191-31758216 transcript_region:SL2.50ch06:31754191..31758216- functional_description:"Isoamyl acetate-hydrolyzing esterase (AHRD V1 **-- B6T5T9_MAIZE); contains Interpro domain(s) IPR013831 Esterase, SGNH hydrolase-type, subgroup "
ref|XP_009796830.1|;PREDICTED: GDSL esterase/lipase CPRD49-like [Nicotiana sylvestris]
NbS00010827g0018.1;protein AED:0.36 eAED:0.36 QI:303|1|1|1|0.8|0.83|6|196|254; (*GB) gi|225440690|ref|XP_002280296.1| (e_value=2e-131) PREDICTED: GDSL esterase/lipase CPRD49 [Vitis vinifera];; (*SWP) sp|Q9SRM5|CPR49_ARATH (e_value=1e-115) GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1;; (*TAIR) AT3G11210.1 (e_value=1e-116) | Symbols: | SGNH hydrolase-type esterase superfamily protein | chr3:3511101-3512899 REVERSE LENGTH=256;; (*ITAG) Solyc06g051720.2.1 (e_value=8e-125) genomic_reference:SL2.40ch06 gene_region:31754191-31758216 transcript_region:SL2.40ch06:31754191..31758216- functional_description:"Isoamyl acetate-hydrolyzing esterase (AHRD V1 **-- B6T5T9_MAIZE); contains Interpro domain(s) IPR013831 Esterase, SGNH hydrolase-type, subgroup ";
AT3G11210.1;| Symbols: | SGNH hydrolase-type esterase superfamily protein | chr3:3511101-3512899 REVERSE LENGTH=256
GO ID (Nr annotation)
GO:0048046 GO:0016787 GO:0008152
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005747 GO:0009414 GO:0009987
Sequence
>NbTI01E03
TTTATCATCTGACATTGTCGTATCTGCAGTCTCCTGTGTTTCATCGATATTTTCGAAGACTAAAAATCACCAGCAGGAGAAAATGGTCGGACCAACAAGT
CGTCCACAGTTTGTGCTGTTTGGTTCATCCATAGTACAGTTCAGCTATAGTTATCAAGGATGGGGTGCAATTCTCGCTGACCTTTATGCTCGCAAGGCAG
ATATAGTGCTGCGTGGATATGCTGGTTGGAATTCAAGGTGCGCTCTTCAAGTCTTGGATGAAGTTTTCCCCAAGGATGCAGCTGTGCAGCCTTCTCTGGT
CATAGTTTATTTTGGAGGGAATGATTCCGTGGAGCCTCACCCAAGTGGCCTGAGTGCTCATGTTCCTCTTCCTGAATATGTAGAGAACATGAGGAAGATC
GCAATTCATCTGAAGAGCCTCTCTGATAAGACACATATAATCCTTCTAAGTGCTCCTGCTGTGAATGAGGCACAAATCACAGAAGTGTTCGGTAACGGCC
TGGGTCGATCAAATGGCTCCTGTCGGAAATATTCAGAAGCTTGTATACAATTGGGACAAGAACTGGGTGTGAAGGTTATTGATCTTTGGACAACACTTCA
GCAAAGGGATGATTGGTTGACTGCTTGCTTTACGGATGGGATACATTTATCTTCTGAAGGCAGCAAGCTTGTTGCCAAGGAAATCTTAAAAGTTCTCAAA
GAGGCAGAGTGGGAACCAAACCTGCATTGGAGATCATTGCCTATAGAATTCCCTGAAATCTCTCCATATATCTTTGTTGATCCCAAGGGTGAGACCGCTG
TGAACGTTTCACAATTGGATCT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1E1-1H12 [7-5-12]//1E3.JPG