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Details




NbTI01E04

Phenotype Description
Moderately stunted, bushy plants
Annotation
Solyc03g097360.2.1;genomic_reference:SL2.50ch03 gene_region:53122339-53128233 transcript_region:SL2.50ch03:53122339..53128233+ functional_description:"BolA-like (AHRD V1 ***- Q67VQ4_ORYSJ); contains Interpro domain(s) IPR002634 BolA-like protein "
ref|XP_009771938.1|;PREDICTED: uncharacterized protein LOC104222403 [Nicotiana sylvestris]
NbS00030519g0019.1;protein AED:0.11 eAED:0.11 QI:0|1|0.66|1|1|1|3|0|156; (*GB) gi|255566058|ref|XP_002524017.1| (e_value=3e-53) transcription regulator, putative [Ricinus communis];; (*TAIR) AT5G17560.1 (e_value=1e-46) | Symbols: | BolA-like family protein | chr5:5788474-5789671 FORWARD LENGTH=177;; (*ITAG) Solyc03g097360.2.1 (e_value=2e-94) genomic_reference:SL2.40ch03 gene_region:53122339-53128233 transcript_region:SL2.40ch03:53122339..53128233+ functional_description:"BolA-like (AHRD V1 ***- Q67VQ4_ORYSJ); contains Interpro domain(s) IPR002634 BolA-like protein ";
AT5G17560.1;| Symbols: | BolA-like family protein | chr5:5788474-5789671 FORWARD LENGTH=177
GO ID (Nr annotation)
GO:0005739 GO:0009507
GO ID (Arabidopsis annotation)
GO:0005739 GO:0009064
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005615 GO:0005791 GO:0005794 GO:0005886 GO:0008021 GO:0009986 GO:0030425 GO:0043195 GO:0044304 GO:0044430 GO:0097449 GO:0098589 GO:1990761 GO:1990812 GO:0016504 GO:0070851 GO:0001878 GO:0006810 GO:0006875 GO:0006928 GO:0007166 GO:0007409 GO:0007626 GO:0010288 GO:0010468 GO:0010952 GO:0019731 GO:0019732 GO:0044238 GO:0044260 GO:0044708 GO:0045087 GO:0045931 GO:0048523 GO:0048589 GO:0050793 GO:0050829 GO:0050830 GO:0050877 GO:0051171 GO:0051239 GO:0051705 GO:0071320 GO:0071874 GO:1901360 GO:1990090 GO:2000112
Sequence
>NbTI01E04
GATGACGAAAGCGTTGTTTGTAAGGCCAAACGTGGCGGCGCTGTGTATCCGGCGATTGAGCAGTTCCGTTCAGCCACGTGTACCTTCATTACTCAAATGC
GTTTCTATTTCTGCTCGTTCCTACAGGCCGATGAAGCTTGTTCCCCAAATAGGTTCAAAGATTGAGCTTTTCGCTGGTCGTCGGGCTTTCTCTACTCGTG
CAACTAGCGATACTGGCTCAATTGATTCTCCTCTTATGGAGTCTATGCAGAAAAAGATCAAGGAGCAGTTGAATGCGGACACAGTTGTAGTTAAAGATGC
TTATGGTGATGGTCGGCATGTCAGCATTGATGTAGTCTCTTCAGCTTTTGAGGGACAATCTGCTGTGAATAGGCAGAGGATGGTCTACAAAGCCATATGG
GAAGAACTTCAGAACACTGTGCATGCAGTTGACCAGATGACTACCAAAACACCGACAGAAGCTGGGAAGTGATCATGGCACAACCGAAGAGTATCAAAAC
ACCACCTCCATCAACTATTCTATTTTTAAGTCACAACTTTTCGATTGGTATCAGATACGTTACTATGAACAATGAGAAATTCGAGTAATGTCAACTCTAA
AGTAGAACTGTATTGCTTTACATTGTTAGTATGAGACGGGGCATTGAATACCTGCCATTTTGTAACAGCCTTGGTTCATTTTCAAAATCCAGTTCTTACC
TACCAGCGGGTTGAAGAACAATAGTTGAATATGCCCATTTGAAAGGAAAACAACTTAAGTCTTTGCCCTATGTCTGAATTTTG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1E1-1H12 [7-5-12]//1E4.JPG