
				Noble Research Institute \| VIGS Database
				VIGS Phenomics and Functional Genomics Database

Details

NbTI01E12

Phenotype Description
Moderately stunted plants
Annotation
Solyc02g088590.2.1;genomic_reference:SL2.50ch02 gene_region:45214266-45218179 transcript_region:SL2.50ch02:45214266..45218179+ functional_description:"Circadian clock coupling factor ZGT (AHRD V1 ***- B4F853_MAIZE)"
ref\|XP_009786456.1\|;PREDICTED: EID1-like F-box protein 2 [Nicotiana sylvestris]ref\|XP_009786462.1\| PREDICTED: EID1-like F-box protein 2 [Nicotiana sylvestris]
NbS00015967g0102.1;protein AED:0.13 eAED:0.13 QI:0\|1\|0.5\|1\|0\|0\|2\|432\|180
AT5G39360.1;\| Symbols: EDL2 \| EID1-like 2 \| chr5:15753313-15754062 REVERSE LENGTH=249
GO ID (Nr annotation)
GO:0005515
GO ID (Arabidopsis annotation)
GO:0005515
GO ID (Tomato annotation)
GO:0005515
GO ID (Niben annotation)
GO:0005515
Sequence
>NbTI01E12 CACGATAACTTGCTTCTCTCCCGTGAACTTCTCCAATCAATTCTTTGGCCGCTCCAAGTTTTGTAGACGATGATCATTACTAAGCAGTATCGCTGCATAC ACTCAGCAAGTTGTAAGTGTACAAAAGGGCATCTTAGTGAAGAAATTATATTTCTGTTTTTTCAGCAATTGAATTGGAATCCAAAGTCGATAGCAACTTT ATCTTGTGTATGCAAATGGTTTGATGACCTTGCAAAGAGAGTGCTCTGGAAGGAGTTTTGTAAGACTAGAGCTCCCAAAATGATGCTTGATTTACAGTCT AGTGGGAGTCATAATGTTGATGGGAACTGGAGGGCTCTTGGAAAGCTTCTTATTTACTGCTCTGGATGTAATAAAGGTGGCTTATTCAATAGCATCCACA TTCCAGGACACTTTGTTTATAGAACTAGGTTCTCTAGGACCTCTGGAAAGAGCTTTCTGTTGCCACAATGCAGGACAGATGTTTTGTATGTTTCTGATCC TTGCGAGCATCTTGACCAAGGAGATGAGGGGGATATTGGATTTTTTCGGGGAATATTTAAATCCTTTGCTTCCTCAAAAGTTCGTAAAATGTTGATTAAG AGGGAGGCGCAGCTCCATCCAACAGAAGTGTGCCCTTACTGTAAGGCTAAACTGTGGAGCATGCTGCAAGCAAAAATGATGCCAGCTAGTGCCAGTTGTA GATTGGGTGCTTATGAAGATGCAATTGAGTATTATGTGTGCCTTTAACGGGCATGTGCTTGGGATATGTACCCTCTTGCCCC

More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1E1-1H12 [7-5-12]//1E12.JPG