| Phenotype Description |
|---|
| Severely stunted plants, mottled, crinkled, small leaves, cell death, no apical meristem |
| Annotation |
|---|
| Solyc04g080590.2.1;genomic_reference:SL2.50ch04 gene_region:62295025-62299348 transcript_region:SL2.50ch04:62295025..62299348- functional_description:"Proteasome subunit alpha type (AHRD V1 ***- Q8H1Y2_NICBE); contains Interpro domain(s) IPR001353 Proteasome, subunit alpha/beta " |
| ref|XP_009771200.1|;PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana sylvestris] |
| NbS00005792g0020.1;protein AED:0.11 eAED:0.11 QI:148|1|0.5|1|0|1|2|0|274; (*GB) gi|22947842|gb|AAN07899.1| (e_value=1e-177) 20S proteasome alpha 6 subunit [Nicotiana benthamiana];; (*SWP) sp|P34066|PSA1A_ARATH (e_value=5e-154) Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3;; (*TAIR) AT5G42790.1 (e_value=3e-155) | Symbols: PAF1, ATPSM30, ARS5 | proteasome alpha subunit F1 | chr5:17159270-17160975 REVERSE LENGTH=278;; (*ITAG) Solyc04g080590.2.1 (e_value=8e-176) genomic_reference:SL2.40ch04 gene_region:62295025-62299348 transcript_region:SL2.40ch04:62295025..62299348- functional_description:"Proteasome subunit alpha type (AHRD V1 ***- Q8H1Y2_NICBE); contains Interpro domain(s) IPR001353 Proteasome, subunit alpha/beta "; |
| AT5G42790.1;| Symbols: PAF1, ATPSM30, ARS5 | proteasome alpha subunit F1 | chr5:17159270-17160975 REVERSE LENGTH=278 |
| GO ID (Nr annotation) |
|---|
| GO:0019773 GO:0004298 GO:0006511 |
| GO ID (Arabidopsis annotation) |
|---|
| GO:0019773 GO:0004298 GO:0006511 |
| GO ID (Tomato annotation) |
|---|
| GO:0019773 GO:0004298 GO:0006511 |
| GO ID (Niben annotation) |
|---|
| GO:0019773 GO:0004298 GO:0006511 |
| Sequence |
|---|
>NbTI01F02
ACTCCAAAAAACGACATCGTTTTATAATTCCTAACATTTGACAAACAGAATGTTCAGAAACCAGTACGATACCGACGTGACGACATGGTCACCGGCGGGG
AGGCTATTTCAGGTAGAGTACGCAATGGAGGCAGTGAAGCAAGGTTCAGCGGCACTAGGTTTGAGATCGAAGACGCACGTGATTCTCGCGTGCGTTAATA
AGGCGAATTCCGAGTTATCCTCTCACCAGAAGAAGATCTTCAAAGTTGATGACCACATCGGAGTTGCAATCGCCGGACTTACTGCCGATAGCCGTGTACT
TTCTCGTTATATGCGTAATGAGTGCATTAATTATAGTTACGCTTATGAGTCGCCGTTTCCTGTAGGCCGCCTTGTTGTTCAGCTCGCTGATAAAGCTCAG
GTCTGCACTCAACGATCCTGGAAACGGCCTTATGGTGTTGGCCTGCTTGTTGGTGGGCTGGATGAGTCTGGTGCTCACCTTTATTACAATTGCCCTAGTG
GTAACTACTTCGAGTATCAAGCTTTTGCCATTGGATCTCGATCACAAGCTGCCAAAACCTACTTGGAACGTAGGTTTGAGACTTTCATGGATTCTTCACG
GGAAAGCCTGCTTAAGGACGCACTCTTTGCACTGAGAGAAACTTTGCAGGGAGAAAAACTAACAAGCACCAATTGCACGGTTGCAGTGGTAGGAGTAGGA
GAGGCTTTTCATATGTTGGACAAGGAAACTATACAAGCATTGATCAATGAATTTGAGATAGCTGGTGAAGAAGCTCCTGCTGCAGCCCCAGATGAAGCTG
GTAGTGATGAACCGGCAGCAGCACCGCCTGCTGATCAGGGAGCTGCCCCGATGGATATTTGATGATGTTATGTCCTCCCTTTAGGCCTCACTTTTTT
|
