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Details




NbTI01F06

Phenotype Description
Moderately stunted, bushy plants, yellow green leaves
Annotation
Solyc02g068090.2.1;genomic_reference:SL2.50ch02 gene_region:32718467-32721668 transcript_region:SL2.50ch02:32718467..32721668- functional_description:"30S ribosomal protein S21, chloroplastic (Fragment) (AHRD V1 *--- RR21_SPIOL); contains Interpro domain(s) IPR001911 Ribosomal protein S21 "
ref|XP_009803782.1|;PREDICTED: uncharacterized protein LOC104249101, partial [Nicotiana sylvestris]
NbS00050087g0002.1;protein AED:0.10 eAED:0.10 QI:0|0|0|0.5|1|1|2|0|193; (*GB) gi|147845835|emb|CAN82190.1| (e_value=4e-50) hypothetical protein VITISV_031115 [Vitis vinifera];; (*TAIR) AT3G27160.1 (e_value=3e-45) | Symbols: GHS1 | Ribosomal protein S21 family protein | chr3:10017531-10018854 FORWARD LENGTH=183;; (*ITAG) Solyc02g068090.2.1 (e_value=1e-47) genomic_reference:SL2.40ch02 gene_region:32718467-32721668 transcript_region:SL2.40ch02:32718467..32721668- functional_description:"30S ribosomal protein S21, chloroplastic (Fragment) (AHRD V1 *--- RR21_SPIOL); contains Interpro domain(s) IPR001911 Ribosomal protein S21 ";
AT3G27160.1;| Symbols: GHS1 | Ribosomal protein S21 family protein | chr3:10017531-10018854 FORWARD LENGTH=183
GO ID (Nr annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Arabidopsis annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Tomato annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Niben annotation)
GO:0005840 GO:0003735 GO:0006412
Sequence
>NbTI01F06
CTCATCCATAGCTAATCTCTTCTTCTTCTTCACTCCCTCAAAACCACCCACCCCCAAAACTCCTCTCCTCCAATTCTCCACCGATTCCCTCTCTTCTTCT
TCTTCTTCTTCTTCAAGCCCCAACCAGGAGGGTAATTTACCTCTTATCTCAACCAACGACCATAGTATTAATAACCACAACCCTTTACCATTATCATCAT
CGTCTTCAAATTCTGATATTACGTCCGTAGTTTGTCCCTCTCTTGCCTACTCGAGCACCCTCTTCTTCAGATCGGCTTACAATGTTCAGGTAATTGTGGA
TGATAATGAGCACGAGGAAAATCTTATTGGTCGATTTCGAAGGGAGGTGATGAGAGCTGGAGTTATTCAGGAATGTAAGCGAAGAAGGTATTTTGAGAAC
ACACAAGACAAAGATAAGCATAAGACCCGTGAGGCTGCTAAGCGTAATCGTCAAAGACATGGGCCACCACCGCCAAGAAATTCCGGACAGGATAAGCAAG
AGACATCCAAGAACAAGAGGAATGACGATGATGGAGATAACTGGGAACTTCCTGATGGAGGTATCCCCAGTTAACTGCAAGTTTCAGCTCTTTTTCCTTT
TAGGCTCTTGGTAGGTTGTGGCTCATTTTCAATCCTGGAGAGGCTTTCTACCCATAAAATATCTGTGTGGATTATTTCCTTACTGTGTTCTACCTGTTTC
GTTTGTTGCAACTTACTAATGGAAACATAATTGTTGACTGCCA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1E1-1H12 [7-5-12]//1F6.JPG