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Details




NbTI01F08

Phenotype Description
Moderately stunted, bushy leaves, yellow green top leaves
Annotation
Solyc07g066310.2.1;genomic_reference:SL2.50ch07 gene_region:65009418-65011119 transcript_region:SL2.50ch07:65009418..65011119+ functional_description:"photosystem II polypeptide (AHRD V1 ***- Q6V7X5_TRIPR); contains Interpro domain(s) IPR006814 Photosystem II protein PsbR "
ref|XP_009774551.1|;PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Nicotiana sylvestris]
NbS00007270g0010.1;protein AED:0.08 eAED:0.09 QI:0|1|0.6|1|1|1|5|0|141; (*GB) gi|225462227|ref|XP_002271791.1| (e_value=1e-61) PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis vinifera];; (*SWP) sp|Q40519|PSBR_TOBAC (e_value=2e-58) Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1;; (*TAIR) AT1G79040.1 (e_value=4e-54) | Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140;; (*ITAG) Solyc07g066310.2.1 (e_value=2e-58) genomic_reference:SL2.40ch07 gene_region:65009418-65011119 transcript_region:SL2.40ch07:65009418..65011119+ functional_description:"photosystem II polypeptide (AHRD V1 ***- Q6V7X5_TRIPR); contains Interpro domain(s) IPR006814 Photosystem II protein PsbR ";
AT1G79040.1;| Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140
GO ID (Nr annotation)
GO:0009654 GO:0015979
GO ID (Arabidopsis annotation)
GO:0009654 GO:0015979
GO ID (Tomato annotation)
GO:0009654 GO:0015979
GO ID (Niben annotation)
GO:0009654 GO:0015979
Sequence
>NbTI01F08
GCAGAAGAAGAGAGTATAGGAAATGGCAAGCACAGTAATGAGCTCATTGAGCCTCAAACCTGCAACTTTCAGTGTTGAGAAGACAGCAGTGAAAGGACTG
CCATCACTTGCTAGGTCTTCTTCTTCCTTCAGAGTTCAAGCTAGTGGTGTCAAGAAGCTTAAGACCGACAAGCCTTACGGAATTAATGGAAGCATGAGCT
TGAGAGACGGCGTTGATGCCTCAGGCAGGAAGCCCAAGGGAAAGGGTGTTTACCAATTCGTTGACAAATATGGAGCAAATGTTGATGGATACAGCCCCAT
CTACAACACAGATGACTGGTCTCCAAGCGGTGATGTCTATGTTGGAGGCACCACTGGCTTAGCCATATGGGCAGTCACCTTGGTTGGCATTCTGGCTGGA
GGTGCTCTCCTTGTTTTCAACACAAGTGCTTTGGCACAGTAGATCATTATCCTTGTACTCCTATTTCAGTTGTATTCCAGCTCGCACCATGTATCTTTTC
AAGAATACTTTGTATTTGCTGGCATCTTGATTAATCTGTAATTGCTGTGGATATTACACATAATGTTGATTATTTAAGGT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1E1-1H12 [7-5-12]//1F8.JPG