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Details




NbTI01G06

Phenotype Description
Moderately stunted plants, chlorotic, yellow green leaves
Annotation
Solyc02g090030.2.1;genomic_reference:SL2.50ch02 gene_region:46276521-46278207 transcript_region:SL2.50ch02:46276521..46278207- functional_description:"Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE); contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbO "
gb|AFH57999.1|;chloroplast PsbO3 precursor [Nicotiana benthamiana]
NbS00010454g0009.1;protein AED:0.20 eAED:0.20 QI:0|1|0.5|1|1|1|2|0|333; (*SWP) sp|Q40459|PSBO_TOBAC (e_value=0.0) Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1;; (*TAIR) AT5G66570.1 (e_value=0.0) | Symbols: PSBO-1, OEE1, OEE33, OE33, PSBO1, MSP-1 | PS II oxygen-evolving complex 1 | chr5:26568744-26570124 FORWARD LENGTH=332;; (*ITAG) Solyc02g090030.2.1 (e_value=0.0) genomic_reference:SL2.40ch02 gene_region:46276521-46278207 transcript_region:SL2.40ch02:46276521..46278207- functional_description:"Oxygen-evolving enhancer protein 1 of photosystem II (AHRD V1 ***- A8J0E4_CHLRE); contains Interpro domain(s) IPR002628 Photosystem II manganese-stabilizing protein PsbO ";
AT5G66570.1;| Symbols: PSBO-1, OEE1, OEE33, OE33, PSBO1, MSP-1 | PS II oxygen-evolving complex 1 | chr5:26568744-26570124 FORWARD LENGTH=332
GO ID (Nr annotation)
GO:0009654 GO:0016021 GO:0019898 GO:0005509 GO:0042549
GO ID (Arabidopsis annotation)
GO:0009654 GO:0016021 GO:0019898 GO:0005509 GO:0042549
GO ID (Tomato annotation)
GO:0009654 GO:0016021 GO:0019898 GO:0005509 GO:0042549
GO ID (Niben annotation)
GO:0009654 GO:0016021 GO:0019898 GO:0005509 GO:0042549
Sequence
>NbTI01G06
AGGCAGCCTCTTTACAAGCAGCTGCTACTCTTATGCAACCAACCAAGGTTGGTGTTGTCTCAGCCAGAAACAACTTGCAGTTGAGATCATCTCAATGTGT
AAGCAAGGCTTTTGGTGTTGAACCAGCTGCTGCTAGGCTTAATTGCTCTTTCCAATCTGATCTTAAAGATTTGGCTCAGAAGTGTACTGATGCTGTTAAG
ATTGCTGGATTTGCTCTTGCCACTTCTGCCCTTGTTGTCTCAGGAGCAAATGCTGAAGGAGTTCCAAAGCGTCTAACCTATGACGAAATCCAGAGCAAGA
CATACATGGAAGTAAAAGGAACTGGAACTGCCAACCAATGCCCAACAATAGATGGAGGTGTTGAGAGCTTTGCCTTCAAGCCAGGCAAATACAACGCCAA
GAAGTTCTGCTTAGAGCACACTTCATTCACCGTTAAGGCAGAGAGTGTAAGCAAGAATGCACCCCCAGAATTCC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1E1-1H12 [7-5-12]//1G6.JPG