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Details




NbTI01G08

Phenotype Description
Stunted, bushy plants, more branches (loss of apical dominance), narrow leaves
Annotation
Solyc08g061270.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch08 gene_region:45656396-45656746 transcript_region:SL2.50ch08:45656396..45656746- functional_description:"Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012876 Protein of unknown function DUF1677, plant "
ref|XP_009595652.1|;PREDICTED: uncharacterized protein LOC104091915 [Nicotiana tomentosiformis]
NbS00019924g0001.1;protein AED:0.34 eAED:0.40 QI:0|0|0|0.66|1|1|3|0|202; (*GB) gi|224088689|ref|XP_002308514.1| (e_value=9e-24) predicted protein [Populus trichocarpa];; (*TAIR) AT1G72510.2 (e_value=7e-18) | Symbols: | Protein of unknown function (DUF1677) | chr1:27303906-27304403 FORWARD LENGTH=165;; (*ITAG) Solyc08g061270.1.1 (e_value=3e-36) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch08 gene_region:45656396-45656746 transcript_region:SL2.40ch08:45656396..45656746- functional_description:"Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012876 Protein of unknown function DUF1677, plant ";
AT1G72510.2;| Symbols: | Protein of unknown function (DUF1677) | chr1:27303906-27304403 FORWARD LENGTH=165
GO ID (Nr annotation)
GO ID (Arabidopsis annotation)
GO:0005737 GO:0016021 GO:0016324 GO:0005391 GO:0005515 GO:0006813 GO:0006814 GO:0006875 GO:0007165 GO:0007586 GO:0010248 GO:0030004 GO:0044093 GO:0046903 GO:0050806 GO:0090662 GO:0098662 GO:1901381
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005746 GO:0005783 GO:0044463 GO:0097458 GO:0098588 GO:0098800 GO:0098803 GO:0003954 GO:0004129 GO:0004497 GO:0005160 GO:0008144 GO:0016705 GO:0097159 GO:1901363 GO:0006123 GO:0009414 GO:0009966 GO:0032501 GO:0042493 GO:0048522 GO:0048523 GO:0051246 GO:0051282 GO:0065009 GO:1902600
Sequence
>NbTI01G08
GGATGCGAGAGTGCGGGAACGAAATCAAGGGCGGTGGTTATGCGGACTGTGCGCGGAGGCGGTGAAGGACGAGATGGTGAGATCGTCGTCGACGGAGAGA
AGGATCGGAAGAGAGGAAGCTTTAAACCGGCATATGACATTTTGCAAGAAATTCAGAGCAAATAGTCTGCCCAAAAATCCGACGGACGAATTAATATCGG
CGGTGAAGCAGTTGTTACTGCGGAGCTTGGATTCCCCACAGTCAAGCAGACAAGGTCTGGTTCAATCACAGAGTTGCTTTTCAGCTATCGATAGTTGAAT
TTGAGCCTTTGGAACGTGTTTGGGTAGTACTGGAAAGAGAGACTTGTTGGGGTAAATTAATAGATTATCAGTTACTATTAGTATTAGGCTTGAATAAATT
CTTGCTGCTTAATGTGGTATGCAAAAAATTGAACCGTTTATGC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

3-1:1E1-1H12 [7-5-12]//1G8.JPG