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Details




NbTI01G11

Phenotype Description
Moderately, bushy plants
Annotation
Solyc01g014850.2.1;genomic_reference:SL2.50ch01 gene_region:15586445-15597388 transcript_region:SL2.50ch01:15586445..15597388- functional_description:"Zinc finger CCCH domain-containing protein 14 (AHRD V1 ***- C3H14_ORYSJ); contains Interpro domain(s) IPR018111 K Homology, type 1, subgroup "
ref|XP_009803026.1|;PREDICTED: zinc finger CCCH domain-containing protein 14-like [Nicotiana sylvestris]
NbS00008770g0001.1;protein AED:0.27 eAED:0.30 QI:0|1|0.66|1|0|0.66|3|0|334; (*GB) gi|225435608|ref|XP_002285629.1| (e_value=5e-123) PREDICTED: zinc finger CCCH domain-containing protein 14-like [Vitis vinifera];; (*SWP) sp|Q7F8R0|C3H14_ORYSJ (e_value=4e-90) Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1;; (*TAIR) AT5G06770.1 (e_value=1e-38) | Symbols: | KH domain-containing protein / zinc finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE LENGTH=240;; (*ITAG) Solyc01g014850.2.1 (e_value=6e-125) genomic_reference:SL2.40ch01 gene_region:15586445-15597388 transcript_region:SL2.40ch01:15586445..15597388- functional_description:"Zinc finger CCCH domain-containing protein 14 (AHRD V1 ***- C3H14_ORYSJ); contains Interpro domain(s) IPR018111 K Homology, type 1, subgroup ";
AT5G06770.1;| Symbols: | KH domain-containing protein / zinc finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE LENGTH=240
GO ID (Nr annotation)
GO:0003723 GO:0046872
GO ID (Arabidopsis annotation)
GO:0003723 GO:0046872
GO ID (Tomato annotation)
GO:0003723 GO:0046872
GO ID (Niben annotation)
GO:0003723 GO:0046872
Sequence
>NbTI01G11
GGGATCTTTTCTTTTGCGACTACGAGTACTTCTACTGCCTCATTAATGGAGTTTGGAGGTGATAGAAAAAGAGGAAGGCCACATGGCCCTATGAATGGCC
ATGGTACTTTTAAGAAATCTAAGCAAGAACTGGAGTCAATTCCAACTGGTATAGGAAGCAAATTGAAGCCGTGCACAAAGTTTTTCAGTACTTCGGGATG
CCCATTTGGGGAAGGATGCCACTTCTTGCATTATGTGCCTGGAGGCCTTAAAGCTGTAACTCAAATGCTTGGCAGCAACCCAGCTCTTCCAGCAGCTTCT
AGAAATTCAATAGCTCCACTGTCTTTCCCTGATGGATCATCTCCTCCAGCTGTTAAGACTCGTCTCTGCAACAAATTCAACACCGCTGAAGGTTGCAAAT
TTGGTGACAAATGTAATTTTGCCCATGGTGAGTGGGAGCTCGGCAAGCCAATGGCTCCATTACATGAGGAGTCCCGTGGTATGTTCCAGACTCATGGATG
GTATGGTAGTCGACCAGAGACAACTCCTGCAGGCTTTGGAGCAGCTGCCAGCTTTGGGTCTTCTGCGACTGCTAAGATCAGTGTAGATGCCTCTCTTGCC
GGACCTATTATTGGAAAAGGTGGTGTCAACTCAAAGCAAATAAGCCGTGTGACTGGAGCCAAAATTTTCCATTAGGGATCACGAGTCGGATCCCTAACTT
GAGGAATATAGAACTTGA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:1E1-1H12 [7-5-12]//1G11.JPG