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Details




NbTI01H07

Phenotype Description
Moderately stunted plants, moderately narrow, pale green leaves
Annotation
Solyc07g005830.2.1;genomic_reference:SL2.50ch07 gene_region:660995-666057 transcript_region:SL2.50ch07:660995..666057+ functional_description:"Translation initiation factor IF-3 (AHRD V1 ***- B9T4Q8_RICCO); contains Interpro domain(s) IPR001288 Translation initiation factor 3 "
ref|XP_009622823.1|;PREDICTED: translation initiation factor IF-3, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00080}-like [Nicotiana tomentosiformis]
NbS00013959g0018.1;protein AED:0.19 eAED:0.19 QI:0|1|0.91|1|0.72|0.66|12|925|267; (*GB) gi|225445818|ref|XP_002276984.1| (e_value=2e-87) PREDICTED: translation initiation factor IF-3 [Vitis vinifera];; (*SWP) sp|Q8YNE3|IF3_NOSS1 (e_value=2e-30) Translation initiation factor IF-3 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=infC PE=3 SV=1;; (*TAIR) AT4G30690.1 (e_value=4e-80) | Symbols: | Translation initiation factor 3 protein | chr4:14960742-14962328 FORWARD LENGTH=281;; (*ITAG) Solyc07g005830.2.1 (e_value=1e-118) genomic_reference:SL2.40ch07 gene_region:660995-666057 transcript_region:SL2.40ch07:660995..666057+ functional_description:"Translation initiation factor IF-3 (AHRD V1 ***- B9T4Q8_RICCO); contains Interpro domain(s) IPR001288 Translation initiation factor 3 ";
AT4G30690.1;| Symbols: | Translation initiation factor 3 protein | chr4:14960742-14962328 FORWARD LENGTH=281
GO ID (Nr annotation)
GO:0003743 GO:0006413
GO ID (Arabidopsis annotation)
GO:0003743 GO:0006413
GO ID (Tomato annotation)
GO:0003743 GO:0006413
GO ID (Niben annotation)
GO:0003743 GO:0006413
Sequence
>NbTI01H07
GATAAGATCCACCACACTGTGTGTTAACTCTCTCTGTAAAACCACCCACCCACCCCACCCCGCCCCATCATCCATGGCGGGTCTTACCACCTTCACTCTC
ACACCCACCATTTCCTCTAAACCAAGTACTAAACCCCTTTTTCTTCCTTCCCTTAATTCTTCCCTTTTTGGCATCCGTTTTCACCTTCCTCAGCTCCGTT
CTTCCTCCTCTCTTATCTATTATGCTGCCACTGTCTCCGCCCGTTATGGCGGCGGAGGCGGCCGTGGTAACTTCCGGCCGCCCCCACGTTCTGATGATGA
TGAAGCCCTTGATATTTCCTCTATCAGGTCAGACAAGGTTAGGCTCATTGATGAAAAGCAGAACATGCTGGGAATTGTGTCAAAAATGGAAGCTCTTCAG
AAAGCCGAGGATGCAAGCCTTGACTTGGTGATTCTATCTCCAGAAGCAGATCCGCCGGTTGTCAAAATGATGGATTACAATAAGTATAAGTATGAACTGC
AAAAG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1E1-1H12 [7-5-12]//1H7.JPG