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Details




NbTI01H09

Phenotype Description
Moderaely stunted plants, pale leaves
Annotation
Solyc03g005780.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch03 gene_region:543035-543838 transcript_region:SL2.50ch03:543035..543838+ functional_description:"Chlorophyll a-b binding protein 3C-like (AHRD V1 **** Q2XTE0_SOLTU); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein "
ref|XP_009597417.1|;PREDICTED: chlorophyll a-b binding protein 50, chloroplastic [Nicotiana tomentosiformis]
NbS00009017g0002.1;protein AED:0.21 eAED:0.21 QI:0|-1|0|1|-1|1|1|0|267; (*GB) gi|3036955|dbj|BAA25396.1| (e_value=0.0) light harvesting chlorophyll a/b-binding protein [Nicotiana sylvestris];; (*SWP) sp|P27496|CB25_TOBAC (e_value=0.0) Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1;; (*TAIR) AT1G29930.1 (e_value=2e-167) | Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267;; (*ITAG) Solyc03g005780.1.1 (e_value=0.0) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch03 gene_region:543035-543838 transcript_region:SL2.40ch03:543035..543838+ functional_description:"Chlorophyll a-b binding protein 3C-like (AHRD V1 **** Q2XTE0_SOLTU); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein ";
AT1G29930.1;| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267
GO ID (Nr annotation)
GO:0016020 GO:0009765
GO ID (Arabidopsis annotation)
GO:0016020 GO:0009765
GO ID (Tomato annotation)
GO:0016020 GO:0009765
GO ID (Niben annotation)
GO:0016020 GO:0009765
Sequence
>NbTI01H09
TATACTGTGTAGTAGCTGCATTTTCAAGAGCATTTCACTTTATTTCTGCAACAATGGCAGCTTCTACAATGGCTCTCTCTTCCTCTTCTTTTGCCGGAAA
GGCGCTGAAACTCTCACCATCTTCCTCTGAGATCACCGGAAATGGAAAAGTCACCATGAGGAAGACAGTTACCAAGGCGAAGCCAGTCTCTTCTGGCAGC
CCATGGTATGGTCCTGATCGCGTCAAGTATTTGGGCCCATTCTCTGGTGAGTCTCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGATGGGATA
CTGCTGGACTTTCAGCTGATCCAGAAACTTTTGCTAAGAACCGTGAGCTAGAGGTGATCCACTGTAGATGGGCCATGCTTGGAGCTCTTGGTTGTGTCTT
CCCCGAGCTCTTGGCCCGTAATGGTGTCAAATTCGGTGAGGCTGTATGGTTCAAGGCTGGATCCCAGATTTTTAGCGATGGTGGACTTGACTACTTGGGC
AACCCAAGTTTGGTCCATGCACAAAGTATCTTGGCCATTTGGGCTTGCCAAGTCGTGTTGATGGGAGCTGTTGAGGGTTACCGTGTTGCTGGTGGGCCTC
TTGGTGAGGTTGTCGACCCACTCTATCCTGGTGGTAGCTTTGACCCATTAGGTCTTGCTGATGATCCAGAGGCTTTTGCTGAGCTCAAGGTGAAGGAGAT
CAAGAACGGTAGACTTGCCATGTTCTCAATGTTTGGGATTCTTCGTTCACGCTATCGTCACAGGTAAAGGTCCATTGGAGAACCTTGCTGACCACCTTGC
CGAT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

3-1:1E1-1H12 [7-5-12]//1H9.JPG