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Details




NbTI02A01

Phenotype Description
Pale green leaves
Annotation
Solyc10g008980.2.1;genomic_reference:SL2.50ch10 gene_region:3003367-3007677 transcript_region:SL2.50ch10:3003367..3007677+ functional_description:"Triose phosphate/phosphate translocator (AHRD V1 **** Q9MSB6_MESCR); contains Interpro domain(s) IPR004696 Tpt phosphate/phosphoenolpyruvate translocator "
ref|XP_009800275.1|;PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Nicotiana sylvestris]
NbS00039230g0010.1;protein AED:0.32 eAED:0.33 QI:0|0.75|0.76|0.92|0.83|1|13|0|400; (*GB) gi|403023|emb|CAA52979.1| (e_value=0.0) phosphate translocator [Nicotiana tabacum];; (*SWP) sp|P29463|TPT_SOLTU (e_value=0.0) Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1;; (*TAIR) AT5G46110.4 (e_value=0.0) | Symbols: APE2, TPT | Glucose-6-phosphate/phosphate translocator-related | chr5:18697606-18700223 FORWARD LENGTH=415;; (*ITAG) Solyc10g008980.2.1 (e_value=0.0) genomic_reference:SL2.40ch10 gene_region:3003367-3007677 transcript_region:SL2.40ch10:3003367..3007677+ functional_description:"Triose phosphate/phosphate translocator (AHRD V1 **** Q9MSB6_MESCR); contains Interpro domain(s) IPR004696 Tpt phosphate/phosphoenolpyruvate translocator ";
AT5G46110.4;| Symbols: APE2, TPT | Glucose-6-phosphate/phosphate translocator-related | chr5:18697606-18700223 FORWARD LENGTH=415
GO ID (Nr annotation)
GO:0016021 GO:0031969 GO:0004693 GO:0005215 GO:0008152 GO:0034219 GO:0051726
GO ID (Arabidopsis annotation)
GO:0005739 GO:0044425 GO:0044763 GO:0044765
GO ID (Tomato annotation)
GO:0005739 GO:0005886 GO:0045121 GO:0015144 GO:0019002 GO:0019003 GO:0030275 GO:0003008 GO:0007264 GO:0015770 GO:0019221 GO:0030154 GO:0035176 GO:0043406 GO:0048513 GO:0048523 GO:0050804 GO:0051000 GO:0051092 GO:0051384 GO:0051385 GO:0065008
GO ID (Niben annotation)
GO:0005747 GO:0005891 GO:0042995 GO:0043204 GO:0004252 GO:0005516 GO:0008331 GO:0043168 GO:0046872 GO:0001505 GO:0006820 GO:0006873 GO:0007270 GO:0007599 GO:0009653 GO:0016043 GO:0017156 GO:0019233 GO:0019538 GO:0021680 GO:0021953 GO:0042445 GO:0043269 GO:0044237 GO:0044281 GO:0044708 GO:0048265 GO:0048523 GO:0050804 GO:0050905 GO:0051899 GO:0070509 GO:0098771 GO:1901564 GO:1902531 GO:1902580 GO:1903530
Sequence
>NbTI02A01
TTGCTTCTGCATCTCAGTTCATTCTCGGGCAACCAATACCTTTAGCACTATGGCTGTCACTGGCTCCAGTCGTCATTGGTGTATCGATGGCTTCATTGAC
TGAGCTTTCGTTCAATTGGTTGGGCTTCATTAGTGCTATGATTTCTAACATCTCCTTCACATACAGGAGTATATACTCGAAGAAAGCTATGACTGATATG
GATAGTACTAACGTCTACGCCTACATATCAATCATTGCCCTTATCGTGTGTATCCCGCCTGCCGTTATTATTGAGGGACCTCAATTGCTCCAGCATGGAT
TTGCTGATGCCATTGCTAAAGTTGGTCTAACGAAATTCGTAACAGATCTGTTTTGGGTGGGAATGTTTTATCACCTCTACAATCAGGTAGCCACAAACAC
CCTTGAGAGGGTGGCACCTCTGACACACGCAGTTGGAAATGTGTTGAAACGTGTGTTCGTGATTGGATTCTCAATTATTGTCTTCGGTAACAAAATTTCC
ACACAAACTGGTATTGGTACCTGCATTGCAATTGCTGGTGTTGCACTCTATTCCTTCATTAAGGCCAAGATGGAGGAAGAGAAAAGGCAAAAGAAAGCTG
CCTGAAAATGAAGAAGCGCTTTTGTGGAAGATGGTTGTTATGGACTCAAGTGTTGATTTTCAATAGTTTCCCCTGTCCAAATAAATGCTAAAAAGGAAAC
CTT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:2A1-2D12[[7-10-12]//2A1.JPG