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Details




NbTI02D03

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc06g068960.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch06 gene_region:39171990-39172454 transcript_region:SL2.50ch06:39171990..39172454+ functional_description:"Calmodulin (AHRD V1 ***- D3PJ43_9MAXI); contains Interpro domain(s) IPR011992 EF-Hand type "
NbS00040030g0001.1;protein AED:0.27 eAED:0.27 QI:0|-1|0|1|-1|1|1|0|166; (*SWP) sp|Q9M7R0|ALL8_OLEEU (e_value=3e-64) Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1;; (*TAIR) AT1G18210.2 (e_value=7e-58) | Symbols: | Calcium-binding EF-hand family protein | chr1:6268273-6268785 REVERSE LENGTH=170;; (*ITAG) Solyc03g118810.1.1 (e_value=4e-91) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch03 gene_region:61676281-61676775 transcript_region:SL2.40ch03:61676281..61676775+ functional_description:"Calmodulin (AHRD V1 ***- D8TKN5_VOLCA); contains Interpro domain(s) IPR003299 Flagellar calcium-binding protein (calflagin) ";
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI02D03
CGGTGTCTCAATGCCCTGGGAACGGAAACAGCTCCCGTCCAATTTTTCCTTGTCATGGGCGAGATTGATACCGGCCGACTCGGTACCCTTACCCTCAATG
AACTTCCTGATTTCTGCTAGGGCGATGCCAACATTGCTGGTGGTGGGCATGGTTATTTTGTTTCGACTAGTTTTTCCCTCTACGATTCGTCCAGTCTCGG
ATTGATCTCTTCTTGTGAGCTCCA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:2A1-2D12[[7-10-12]//2D3..JPG