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Details




NbTI02D04

Phenotype Description
Moderately stunted plants, pale and less number of leaves
Annotation
Solyc06g054260.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch06 gene_region:33565231-33565857 transcript_region:SL2.50ch06:33565231..33565857- functional_description:"Photosystem I reaction center subunit II (AHRD V1 ***- B4FAW3_MAIZE); contains Interpro domain(s) IPR003685 Photosystem I protein PsaD "
ref|XP_009621208.1|;PREDICTED: photosystem I reaction center subunit II, chloroplastic [Nicotiana tomentosiformis]
NbS00037361g0001.1;protein AED:0.33 eAED:0.33 QI:0|-1|0|1|-1|1|1|0|206; (*GB) gi|131167|sp|P29302.1|PSAD_NICSY (e_value=6e-132) RecName: Full=Photosystem I reaction center subunit II, chloroplastic; AltName: Full=Photosystem I 20 kDa subunit; Short=PSI-D; Flags: Precursor;; (*SWP) sp|P29302|PSAD_NICSY (e_value=2e-133) Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1;; (*TAIR) AT1G03130.1 (e_value=1e-99) | Symbols: PSAD-2 | photosystem I subunit D-2 | chr1:753528-754142 REVERSE LENGTH=204;; (*ITAG) Solyc06g054260.1.1 (e_value=1e-124) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch06 gene_region:33565231-33565857 transcript_region:SL2.40ch06:33565231..33565857- functional_description:"Photosystem I reaction center subunit II (AHRD V1 ***- B4FAW3_MAIZE); contains Interpro domain(s) IPR003685 Photosystem I protein PsaD ";
AT4G02770.1;| Symbols: PSAD-1 | photosystem I subunit D-1 | chr4:1229247-1229873 REVERSE LENGTH=208
GO ID (Nr annotation)
GO:0009538 GO:0015979
GO ID (Arabidopsis annotation)
GO:0009538 GO:0015979
GO ID (Tomato annotation)
GO:0009538 GO:0015979
GO ID (Niben annotation)
GO:0009538 GO:0015979
Sequence
>NbTI02D04
CTGCCCCAAAATCCTCTTCCCCATGGAAACAATCCCTCGCTTCCTTCTCTCCTAAGCAACTCAAATCCACTGTTTCCACACACCGTCCCATTAGGGCCAT
GGCCGAAGAAGCAGCCGCCGCCACAAAAGAAGCAGAGGCTCCAGTGGGCTTCACCCCACCACAATTGGACCCAAACACACCTTCCCCAATCTTCGGCGGG
AGCACCGGTGGGCTTCTCCGCAAGGCCCAAGTTGAGGAATTCTACGTAATCACTTGGGAATCACCTAAAGAACAGATCTTTGAGATGCCAACTGGTGGTG
CGGCTATATGAGGGAAGGTGCTAATTTGCTGAAATTGGCGAGGAAAGAGCAGTGTTTGGCACTTGGTACTAGGCTGAGGTCAAAGTACAAGATTAACTAC
AGGTTTTACAGGGTGTTTCCTAATGGTGAAGTTCAATACTTGCATC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:2A1-2D12[[7-10-12]//2D4..JPG