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Details




NbTI02F10

Phenotype Description
Chlorotic leaves, white colour around vein on top leaves
Annotation
Solyc05g008530.2.1;genomic_reference:SL2.50ch05 gene_region:2858442-2863385 transcript_region:SL2.50ch05:2858442..2863385- functional_description:"Sec-independent protein translocase TatC (AHRD V1 ***- Q3MG73_ANAVT); contains Interpro domain(s) IPR019822 Twin arginine-targeting protein translocase, TatC "
ref|XP_009766227.1|;PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Nicotiana sylvestris]
NbS00024496g0009.1;protein AED:0.01 eAED:0.01 QI:183|1|1|1|1|1|4|308|349; (*GB) gi|255582927|ref|XP_002532235.1| (e_value=2e-154) Sec-independent protein translocase protein tatC, putative [Ricinus communis];; (*SWP) sp|P54086|TATC_SYNY3 (e_value=3e-83) Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1;; (*TAIR) AT2G01110.1 (e_value=2e-140) | Symbols: APG2, UNE3, PGA2, TATC | Sec-independent periplasmic protein translocase | chr2:83786-85088 REVERSE LENGTH=340;; (*ITAG) Solyc05g008530.2.1 (e_value=0.0) genomic_reference:SL2.40ch05 gene_region:2858442-2863385 transcript_region:SL2.40ch05:2858442..2863385- functional_description:"Sec-independent protein translocase TatC (AHRD V1 ***- Q3MG73_ANAVT); contains Interpro domain(s) IPR019822 Twin arginine-targeting protein translocase, TatC ";
AT2G01110.1;| Symbols: APG2, UNE3, PGA2, TATC | Sec-independent periplasmic protein translocase | chr2:83786-85088 REVERSE LENGTH=340
GO ID (Nr annotation)
GO:0016021
GO ID (Arabidopsis annotation)
GO:0016021
GO ID (Tomato annotation)
GO:0016021
GO ID (Niben annotation)
GO:0016021
Sequence
>NbTI02F10
GTCAGAAGAAGATTCCTGGCACCAATTGTCCTTGGATCTTCAGTGCTTTTCTACGCCGGCATTGTTTTCTCACACTTGGTTCTCACTCCAGCAGCCTTGA
ATTTCTTTGTGAATTATGCAGAAGGGGCTGTGGAATCCTTTTGGTCCATTGATCAATACTTCGAATTTGTGCTCGTACTCATGTTCAGTACAGGATTGTC
TTTCCAGGTTCCTGTTATTCAACTGCTTCTGGGACAAACCGGCCTTGTATCTGGAGATCAAATGCTGTCCATTTGGAGATACGTGGTGGTAGGTGCTGTC
GTTGCTGCTGCAGTGCTCACACCATCAACTGATCCCCTTACTCAAATGCTTCTTGCTGGTCCCCTTTTGGGACTTTACTTGGGTGGAGCATGGATGGTTA
AGCTTTCTGGGCGATGAGTGATCAACGTTCTGTGGTCAAAGCTTAAGTTCTTTTGCATCAATATACCGAAGAATTAGTAGAAAATGATCATGCATAGGAC
CAAAATTCATGTAGCATAAAAAGGACATTTGAGTGAGGATATATTATCTGTTTTTAAAATACCATTTACTATTGTCATAATCCATGTAATACTATCCAAT
GTGTATAATTAGGAGATTAGGTGACAATCTATTCCCGAAATCGTTTTAATGGATCTTTTTACTAATATGTGAATG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:2E1-2H12[7-9-12]//2F10..JPG