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Details




NbTI03A01

Phenotype Description
Mottled leaves
Annotation
Solyc06g066000.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch06 gene_region:37752991-37753662 transcript_region:SL2.50ch06:37752991..37753662- functional_description:"ATP synthase subunit b&apos (AHRD V1 ***- D8G4T7_9CYAN); contains Interpro domain(s) IPR002146 ATPase, F0 complex, subunit B/B', bacterial and chloroplast "
ref|XP_009771417.1|;PREDICTED: uncharacterized protein LOC104221959 [Nicotiana sylvestris]
NbS00017897g0002.1;protein AED:0.45 eAED:0.45 QI:0|-1|0|1|-1|1|1|0|100; (*GB) gi|225430312|ref|XP_002285183.1| (e_value=2e-48) PREDICTED: uncharacterized protein LOC100250997 [Vitis vinifera];; (*SWP) sp|P31853|ATPX_SPIOL (e_value=6e-50) ATP synthase subunit b', chloroplastic OS=Spinacia oleracea GN=ATPG PE=1 SV=2;; (*TAIR) AT4G32260.1 (e_value=1e-39) | Symbols: | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | chr4:15573859-15574586 REVERSE LENGTH=219;; (*ITAG) Solyc06g066000.1.1 (e_value=2e-51) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch06 gene_region:37752991-37753662 transcript_region:SL2.40ch06:37752991..37753662- functional_description:"ATP synthase subunit b&apos (AHRD V1 ***- D8G4T7_9CYAN); contains Interpro domain(s) IPR002146 ATPase, F0 complex, subunit B/B', bacterial and chloroplast ";
AT4G32260.1;| Symbols: | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | chr4:15573859-15574586 REVERSE LENGTH=219
GO ID (Nr annotation)
GO:0045263 GO:0015078 GO:0015986
GO ID (Arabidopsis annotation)
GO:0045263 GO:0015078 GO:0015986
GO ID (Tomato annotation)
GO:0045263 GO:0015078 GO:0015986
GO ID (Niben annotation)
GO:0045263 GO:0015078 GO:0015986
Sequence
>NbTI03A01
CAATTACAACAGCAAATATCTTAAGTGTTTATACATATCTACTCGTAGAAGAACAGAAATAAACCATGGCCAACATGATCATGGCCTCCTGCAAGGCCAT
TATCACTTCATCTCCATCTCCAAGATTTAAACTTTCCCTCCCTCAAATCTCCCTTCCAAAACTAGCCCTCCCCAAATTACTCAAATCACACAAACCCCTC
TCCCTCCCATCAAACCTCAAGTCCATTTCTGTAATTCTTGCTACCACATCGGCTGTAGCACCACCTTCACTCGCAGAAGAAATTGAAAAATCCTCCCTTT
TGACTTCAACTTGACACTTCCATAATCATGGCTGAATTCCTCTTTCTCATGTTTGCTTTAGACAAGCTTTACTTTTCCCCATTAGGGAAATTCATGGATG
AAAGAGATTCTTCGATTAAGGAGAAATTAAACAGCGTAAAGGACACATCTGCAGAAGTGAAGCAATTGGAAGATCAAGTTGCTGCTATTATGAAAGCTGC
AAGAGCAGAAATATCAGCAGCATTGAATAAAATGAAGAAAGAGACTCAACTAGAAGTTGAACAGAAGATGGCAGAAGGGAGAAAGAAAGTTGAGGCTGAG
TTACAAGAAGCACTGGCTAAGTTTGGATAAGCAAAAGGAGGAGACTATTAAGAGTCTTGACTCTCAGATTGCTGCTCTTAGTGATGAGATTGTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3A1..JPG