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Details




NbTI03A03

Phenotype Description
Mottled leaves
Annotation
NbS00022536g0009.1;protein AED:0.28 eAED:0.30 QI:0|0.83|0.57|1|0.66|0.57|7|1610|232; (*GB) gi|356523801|ref|XP_003530523.1| (e_value=1e-75) PREDICTED: vacuolar protein sorting-associated protein 32 homolog 1-like [Glycine max];; (*SWP) sp|Q9SZE4|VP322_ARATH (e_value=6e-70) Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=1 SV=1;; (*TAIR) AT4G29160.2 (e_value=1e-71) | Symbols: SNF7.1 | SNF7 family protein | chr4:14381350-14382342 FORWARD LENGTH=192;; (*ITAG) Solyc05g026050.2.1 (e_value=4e-77) genomic_reference:SL2.40ch05 gene_region:39648364-39651972 transcript_region:SL2.40ch05:39648364..39651972+ functional_description:"Charged multivesicular body protein 4b (AHRD V1 ***- B6UES0_MAIZE); contains Interpro domain(s) IPR005024 Snf7 ";
GO ID (Niben annotation)
Sequence
>NbTI03A03
AAATTTGATTAATTTCCAATTCTCCAAAACCTCTCAAGTTTGCTCAGATCAGTCCATCAAACTCTACTCTCAAACGCGTAATAAAGCAAACCTGAGTTAA
ATAATTTTGATTTTCTGAAGCTTTAGCAATGTTTCCCCGACTCTTTGGAAAACCTAAACAAGAAACAAATGCTCTAGCTACGCTAGACAAGCTAAACGAG
ACTCTTGAGATGCTTGAGAAAAAGGAGAAGGTTTTACTGAAGAAGGCTGCCGGTGAGGTTGAAAAAGCTAAGGAATTTACTAGAGC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3A3..JPG