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Details




NbTI03A12

Phenotype Description
Bushy plants, pale green leaves
Annotation
Solyc01g108110.2.1;genomic_reference:SL2.50ch01 gene_region:87225177-87233490 transcript_region:SL2.50ch01:87225177..87233490+ functional_description:"Alpha 1 3 fucosyltransferase (AHRD V1 **** Q5DTC8_MEDSA); contains Interpro domain(s) IPR001503 Glycosyl transferase, family 10 "
gb|ABU48860.1|;fucosyltransferase 1 [Nicotiana benthamiana]
NbS00010347g0003.1;protein AED:0.18 eAED:0.18 QI:158|1|0.85|1|1|1|7|322|500; (*GB) gi|156103424|gb|ABU48860.1| (e_value=0.0) fucosyltransferase 1 [Nicotiana benthamiana];; (*SWP) sp|Q9FX97|FUT12_ARATH (e_value=0.0) Putative fucosyltransferase-like protein OS=Arabidopsis thaliana GN=FUT12 PE=2 SV=1;; (*TAIR) AT1G49710.1 (e_value=0.0) | Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | fucosyltransferase 12 | chr1:18391622-18393769 REVERSE LENGTH=513;; (*ITAG) Solyc01g108110.2.1 (e_value=0.0) genomic_reference:SL2.40ch01 gene_region:87225177-87233490 transcript_region:SL2.40ch01:87225177..87233490+ functional_description:"Alpha 1 3 fucosyltransferase (AHRD V1 **** Q5DTC8_MEDSA); contains Interpro domain(s) IPR001503 Glycosyl transferase, family 10 ";
AT1G49710.1;| Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | fucosyltransferase 12 | chr1:18391622-18393769 REVERSE LENGTH=513
GO ID (Nr annotation)
GO:0016021 GO:0032580 GO:0018392 GO:0006486 GO:0036065
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005578 GO:0004222 GO:0005509 GO:0008270 GO:0006508 GO:0030574
Sequence
>NbTI03A12
AACTGTATATCATGTATATGTAGGTGAAAGAGGCAGGTTTGAGATGGATTCCATTTTCTTAAGGTCGAGTGATTTGTCTTTGAAGGCGTTTGAATCTGCT
ATCCTCTCGAGGTTCAAGTCTGTTAAACATGTTCCTGTTTGGAAGGAGGAAAGACCTCAAGTACTACGAGGTGGTGATGAACTCAAACTTTACAAAGTAT
ATCCTGTTGGCTTGACACAGAGACAAGCATTGTTTTCCTTCAGATTCAACGGGGATACTGAGTTTAACAATTACATTCAAAGCCACCCATGTGCAAAATT
TGAAGCCATCTTCGTATAGTTGGAAGTTTGAAATTTTGCTAGTTACAGAGTTGCAGGCAATGTCATTCTCTCCCCGTGCCTTCACTGTCTTACATTATTC
TGGATTGGATCTTGCCCTGTTGAGTCAGAATGTGATGGTTACAGTCTTACCAATGGTGAATCCCATATTTGGTGTAAAATTCTTGTCCTTCAAATTTTCA
AGCGTAAAGGATGGCCAAGAGAAGGATTAACCTTTGCCTTCTATAGATTTTTAAGTGCGGTGGGGGATTTTTCAAGCTGAGAATTGTAGTTTAGTTCAGA
CTGCAGGTTAGTGTTACAGGTATTGACAACGGTAGGAACTTTTGCAAGAGGGTATTCCTTTTAATATATT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3A12..JPG