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Details




NbTI11B03

Annotation
Solyc01g099780.2.1;genomic_reference:SL2.50ch01 gene_region:81681050-81683267 transcript_region:SL2.50ch01:81681050..81683267+ functional_description:"Translationally-controlled tumor protein homolog (AHRD V1 ***- B5XDL0_SALSA); contains Interpro domain(s) IPR001983 Translationally controlled tumour-associated TCTP "
ref|XP_009763574.1|;PREDICTED: translationally-controlled tumor protein homolog [Nicotiana sylvestris]
NbS00012559g0006.1;protein AED:0.08 eAED:0.08 QI:148|0.6|0.83|1|0.8|0.83|6|454|181; (*GB) gi|115502466|sp|P43349.2|TCTP_SOLTU (e_value=3e-93) RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=p23;; (*SWP) sp|P43349|TCTP_SOLTU (e_value=8e-95) Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2;; (*TAIR) AT3G05540.1 (e_value=5e-85) | Symbols: | Methionine sulfoxide reductase (MSS4-like) family protein | chr3:1606487-1608030 REVERSE LENGTH=168;; (*ITAG) Solyc01g099770.2.1 (e_value=4e-97) genomic_reference:SL2.40ch01 gene_region:81675491-81677536 transcript_region:SL2.40ch01:81675491..81677536+ functional_description:"Translationally-controlled tumor protein homolog (AHRD V1 ***- B5XDL0_SALSA); contains Interpro domain(s) IPR001983 Translationally controlled tumour-associated TCTP ";
AT3G05540.1;| Symbols: | Methionine sulfoxide reductase (MSS4-like) family protein | chr3:1606487-1608030 REVERSE LENGTH=168
GO ID (Nr annotation)
GO:0005737
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005578 GO:0005581 GO:0005694 GO:0032501 GO:0044763 GO:0044767
Sequence
>NbTI11B03
CCGGGATTGGTCTCTTCTTGTCATCCTCCTACTTTTTAGAGAGAGAAAGCAAAAGAATACGCTACCACCATGTTGGTTTATCAGGATCTTATCTCCGGTG
ATGAGCTCCTCTCAGATTCATTTCCCTACAAAGAACTTGAGAATGGATGTCTTTGGGAGGTTCAAGGGAAGTGGGTTGTTCAAGGTGCTCTTGATGTAGA
CATTGGGGCGAATCCTTCTGCTGAGGGTGCAGATGAAGATGAAGGTGTGGATGATCAAGCTGTCAAGGTTGTCGATATTGTTGACACTTTCAGACTTCAG
GAGCAACCATCTTTTGACAAGAAACAATTTGTTACATACATGAAGAGATACATCAAGAACCTGACTCCCAAGCTAGAAGGAGAAGCCCAAGAAGCATTTA
AAAAGAACATTGAATCAGCAACTAAGTTCCTCATGTCAAAGCTCAAGGACCTTCAGTTCTTTGTTGGCGAGAGCATGCATGACGATGGTGCCCTGGTGTT
TGCATACTACAAGGATGGTGCAACTGATCCTACCTTTTTGTACCTTGCACCTGGCTTGAAGGAGGTCAAGTGCTAGATGTCTGTTTGGAGATTTTGAGCT
ACAAGTTTCAAATTTGAGATGTTCCATGTAGTTTTAAGTTTTTATC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit