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Details




NbTI13F07

Annotation
Solyc01g009030.2.1;genomic_reference:SL2.50ch01 gene_region:3025820-3038891 transcript_region:SL2.50ch01:3025820..3038891+ functional_description:"Nuclear control of ATPase protein (AHRD V1 *--- C9SK53_VERA1); contains Interpro domain(s) IPR013946 Nuclear control of ATP synthase 2 "
ref|XP_009765760.1|;PREDICTED: uncharacterized protein LOC104217264 isoform X1 [Nicotiana sylvestris]ref|XP_009765761.1| PREDICTED: uncharacterized protein LOC104217264 isoform X2 [Nicotiana sylvestris]
NbS00010066g0035.1;protein AED:0.19 eAED:0.19 QI:171|1|1|1|0.92|1|14|288|598; (*GB) gi|359479309|ref|XP_003632255.1| (e_value=0.0) PREDICTED: uncharacterized protein LOC100242629 [Vitis vinifera];; (*SWP) sp|Q55GJ3|NCA2_DICDI (e_value=1e-14) Nuclear control of ATPase protein 2 OS=Dictyostelium discoideum GN=nca2 PE=3 SV=1;; (*TAIR) AT5G12290.1 (e_value=0.0) | Symbols: DGS1 | dgd1 suppressor 1 | chr5:3974374-3978066 REVERSE LENGTH=602;; (*ITAG) Solyc01g009030.2.1 (e_value=0.0) genomic_reference:SL2.40ch01 gene_region:3025820-3038891 transcript_region:SL2.40ch01:3025820..3038891+ functional_description:"Nuclear control of ATPase protein (AHRD V1 *--- C9SK53_VERA1); contains Interpro domain(s) IPR013946 Nuclear control of ATP synthase 2 ";
AT5G12290.1;| Symbols: DGS1 | dgd1 suppressor 1 | chr5:3974374-3978066 REVERSE LENGTH=602
GO ID (Nr annotation)
GO:0005741 GO:0016021 GO:0043234 GO:0019375 GO:0050665
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI13F07
CATCATTATTGGTTGAAATGAATGATCTATTTCTTAAGTTGGAGGCATCAATTGGCCATTTCCATGCAATGCGCCGGCAAAGCTCTTCTGTTGATGAAAG
CTATTCTTTTCCCTTGATATTCGAGAAACTTCCAGAAGTAAATCAAGAAGGCTCTCGATGGACTGATTGTGAGATTAGAGATGCCATCGGTCTGATCTAC
CAAAATATAGACAGATTGAACACCTATTTAGCTGCCATTGTTACAATTCACCGAAAGCCCAGGAAAGTTACTCGTTACTGGATACCGTATACCTGTGGGA
TTGTCGGCATCTCTATTTGTTCATTATGGTTTATTCGCCATAGCAGTTTAGTAGGAAGCTCTGACATTGACAATTGGATTCGTGAGGCGAAGGACTCAAC
ACGTAGCTTCTGGAATGACCATGTAGAGCAACCGCTTCTCTCTATTAGAGACGATCTTTTCTACACTTTCCGGAAGAGGCAGAAGGGAGCAATGGAACCT
GAAGAAGTGCAGTTAACTGCTGACTCTCTACATAGAATGTTGCAAGCTTTCACTGAGCAGACAAAGGGTGAGAAGGCTCCACCTAATGCAACGGATCAGC
AAATGCTTGAAATAGTAATGATGAGGTATGAAAAGGAACTGATGCATCCCATTCAAAATCTTTTTTCTGGAGAGCTTTCTCGTGCTCTTCTTATCCAGGT
TCAGAAGCTGAAGCTTGACATTGAAGAGGCTATGCTGGAGCTGGATCAAATTCTTAGGGCCAATGAAATCAACTTTGCTATTTTAGCTGCTTTGCCTGCT
TTCTTCC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit