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Details




NbTI13H07

Annotation
Solyc05g012160.2.1;genomic_reference:SL2.50ch05 gene_region:5356573-5358187 transcript_region:SL2.50ch05:5356573..5358187- functional_description:"Nitrilase associated protein-like (Fragment) (AHRD V1 *--- Q1HEA6_MUSAC)"
ref|XP_009593870.1|;PREDICTED: protein SPIRAL1-like 1 [Nicotiana tomentosiformis]
NbS00001212g0013.1;protein AED:0.31 eAED:0.31 QI:172|1|1|1|0.5|0.33|3|242|112; (*SWP) sp|B3H4F1|SP1L1_ARATH (e_value=3e-29) Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1;; (*TAIR) AT1G26355.1 (e_value=2e-30) | Symbols: SP1L1 | SPIRAL1-like1 | chr1:9117950-9118611 REVERSE LENGTH=113;; (*ITAG) Solyc05g012160.2.1 (e_value=1e-49) genomic_reference:SL2.40ch05 gene_region:5356573-5358187 transcript_region:SL2.40ch05:5356573..5358187- functional_description:"Nitrilase associated protein-like (Fragment) (AHRD V1 *--- Q1HEA6_MUSAC)";
AT1G26355.1;| Symbols: SP1L1 | SPIRAL1-like1 | chr1:9117950-9118611 REVERSE LENGTH=113
GO ID (Nr annotation)
GO ID (Arabidopsis annotation)
GO:0005515 GO:0008234
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005634 GO:0005747 GO:0005759 GO:0014069 GO:0017146 GO:0000166 GO:0003682 GO:0004972 GO:0005261 GO:0005504 GO:0008137 GO:0030165 GO:0030374 GO:0035403 GO:0042393 GO:0046872 GO:0047485 GO:0050681 GO:0001964 GO:0006120 GO:0006357 GO:0006633 GO:0008104 GO:0009611 GO:0010829 GO:0030949 GO:0033058 GO:0035235 GO:0035408 GO:0042113 GO:0042177 GO:0043123 GO:0045766 GO:0046627 GO:0050853 GO:0050861 GO:0050885 GO:0051092 GO:0060079 GO:0098655
Sequence
>NbTI13H07
TAACATTGATCTGATCTGAAAGAATCAAAGGTTGTTGCTGGAACTCTTTAACAAGAGAGAATTTGAGATATGGGTCGTGGAGTCAGCTATGGAGGAGGGC
AAAGTTCACTGGGATACTTATTTGGGGGTGGTGAAGCGCCAAAATCAACCACGGAAAATGTCCAAGCTGTTCAAAGTGAAGGACAGGCAATAAATAAAGA
GCCAGCTTCAAAGCCTGCTGTTTCTGCTCCAGTTGATGCTACTAAGCAGATTCCTGCCGGTATTCAGAGCACCCATTCATTTAACCATTTCAGGAGAGAT
GGTCAAAACACAGGAAATTTTATCACGGACCGACCATCTACCAAAGTCCATGCTGCTCCTGGAGGTGGATCTTCTTTGGGATATCTCTTCGGCGATGGCA
GCAGCTAAGCAATTCTCCAACCTACAGTTGGATAATTGTCTTATCGCTTCTTTACCTTTTGCTTTTCGACTACGTTGTAATTGTAATTGCGAGTATTTCA
GGTCGTTGTGAAGTGTTAATTGGATAAACTTTCGTCTAAAGTCCCAGTTGACACTTGAAACTAAAGTTGCTACTATCTGATGTAATATGTTACTTTTGTT
GATTGATCATTTGATTGAACAGCTTTTGTTGCCT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit