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Details




NbTI14H04

Annotation
Solyc11g068820.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch11 gene_region:50513890-50516507 transcript_region:SL2.50ch11:50513890..50516507- functional_description:"50S ribosomal protein L27 (AHRD V1 ***- Q8LEF5_ARATH); contains Interpro domain(s) IPR001684 Ribosomal protein L27 "
sp|P30155.1|RK27_TOBAC;RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursorgb|AAA34104.1| ribosomal protein L27 [Nicotiana tabacum]gb|AAA34115.1| ribosomal protein L27 [Nicotiana tabacum]
NbS00026868g0001.1;protein AED:0.10 eAED:0.10 QI:0|1|0.66|1|1|1|3|660|189; (*GB) gi|266936|sp|P30155.1|RK27_TOBAC (e_value=5e-99) RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursor;; (*SWP) sp|P30155|RK27_TOBAC (e_value=1e-100) 50S ribosomal protein L27, chloroplastic OS=Nicotiana tabacum GN=RPL27 PE=1 SV=1;; (*TAIR) AT5G40950.1 (e_value=2e-77) | Symbols: RPL27 | ribosomal protein large subunit 27 | chr5:16410866-16411845 FORWARD LENGTH=198;; (*ITAG) Solyc11g068820.1.1 (e_value=1e-98) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch11 gene_region:50513890-50516507 transcript_region:SL2.40ch11:50513890..50516507- functional_description:"50S ribosomal protein L27 (AHRD V1 ***- Q8LEF5_ARATH); contains Interpro domain(s) IPR001684 Ribosomal protein L27 ";
AT5G40950.1;| Symbols: RPL27 | ribosomal protein large subunit 27 | chr5:16410866-16411845 FORWARD LENGTH=198
GO ID (Nr annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Arabidopsis annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Tomato annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Niben annotation)
GO:0005840 GO:0003735 GO:0006412
Sequence
>NbTI14H04
CTTCTCCCTCTGAGACGTGTAAAATGGCAGTGAGTTTCAGTTTAGTTGGAGCATTCAAAGGACTCTCTTTAGCTTCTTCGTCTTCTTTCCTTAATGGTGA
CTTTGGTGCTGCTTTTCCCGTTGCTCCCAAGTTTTCGGTGTCGTTTCCGTTGAAATCTCCGTTGACAATTGAGTCTGCTCACAAGAAAGGAGCTGGTAGC
ACTAAGAATGGTCGAGATTCTCCTGGTCAGAGACTTGGTGTCAAGATTTTTGGTGACCAAGTTGCAAAGCCCGGTTCTATTATCGTTCGCCAGCGTGGTA
CTAAGTTTCACCCAGGAAAGAATGTTGGACTTGGCAAGGATCACACGATCTTTTCTTTGATTGATGGACTAGTGAAATTTGAGAAGTTTGGGCCTGATAG
AAAAAAGATAAGTGTTTATCCACGTGAGGTGCAACCTGAAAATCCCAACAGTTATAGAAACCGAAAAAGGGAGTCCTTCAGAGTACAACGTGAACGCAGA
AAGGCACGAAGAGAGGGCGTCATCCTTCAGCCTCAGTCGATACTTGCTTCAGCTCCTGAATCCTCCGAAGATACTCACAGTCACTCTTGCTGATATTGAT
CTTTTGGTGTTTAAACATTATGTTTTCGTTTCGGTTATTTGTTAGTAGTCACTTGGAAACATATGCAGGGGAACAATGCTACATTGTGCTTCTGCCATT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit